YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46434259, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNSIGFEEE NDTACDATSK VKQSRSASSL NSSSSRRNSL ERMSHDEGIS SPTSSINYMS  60
   61 SSSTKSPPPS PPKSPRLENT KKMFKMMSIT SPMGSSSESV VLSDSDERSS LELQERGTIT 120
  121 PSRHMEINQS SDEDDTEFDS TRLRFSARKG RRKSGTDEES PSKRSIKLSR GASPARKGRR 180
  181 RGSSPSPHSD TNTQGKSSST SKRKLRRKSK ESDKSHRSEF FGTGYTSMPT SGKVFRNLLI 240
  241 LEENLREQVI QQRAMRRKYL TFLSILCSII AALSHHLFFL DNSSTGTLKV ILQFCLLATI 300
  301 VTLMLYHLSG EYQKTIVLPR RFLSSTNQGL RQLNVRLVKI KTPFFDKLTD LIREISLAIV 360
  361 NFNLSVFHKL SPESIQNKNS KIEVFLVTCQ SQCQPRIGVT DVKLVLNARV FNTDIREGWE 420
  421 MYRSEFWINE GIRRRNNMLS FISGSPVAKP VGLKRRKRKS ENNDSSIKPK SIPASLSEQN 480
  481 LQVLSSGFEY NNDNNVDLRS ETSSPLRSDT LVSD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle