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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.719
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLINKTQQYI IGYSSISIAL LRWSIYDSLR KSFNFVMFLV EFTDGIKLGI IVNFIIFLFL  60
   61 IIDKSLQILL FGSLRMIEVE HLFEKLPICV INLLLNLATG DNNIIMNVFL MGLSMSFKVF 120
  121 HVIMFDRLDY VNLIIVNKIN DEDIYLNQVI YHFGTSISFW LNIFFIFADF RLAKFLVYDV 180
  181 FQGINSVTCL LFGFQFAVQG VQALTYFSKL LLGIYEIAFY RIRKNEHHTS LRGWQESTTT 240
  241 SANLEETERT TNNNDNESGQ VEVEVEANID EDVDVDADAD ADVDVEEEIV NDEDDDIELI 300
  301 WENKPYYTKG IDIASAVLTS ISYLSFVYLL TIHSGLSLPL SMLQGTYSSM RRAWVETNQL 360
  361 LAFIESSKRL DTQLANASAE DLSQSDSLCI ICREDMHSVE DYQRIFKKPQ SPRRSPKKLK 420
  421 CGHILHLGCL KEWLERSDSC PLCRRKVFSN DGATNATNNN NNNNGENNQN NGNVPPPQPG 480
  481 DVPVPPPAPT ATATATAAAV NAELQREVTE INDLLQNAEN TIAPQEQPIN TAAEPIEGPS 540
  541 RTIPLPSSSS TLPIPQSNDL SQSITLPKNA LLPPGWLVIP LKKPEQENSD IDYKVNISSY 600
  601 HQADLKINNK KPSTRDIITY AIPKEESIGE YEM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle