YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.5650
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDYTITVLG CGVMGTAVTS AILKSKFDPY PKKIIACTIP SQEQSLKETF ADQPLVHVSA  60
   61 GVENNNKAVT EADVIILGCK PYMYEGIYEE VKESLTGKQL LISLLAGTTI KELSIFTPYV 120
  121 AKVMTNTPAR FGCGTAAIAF APEVGEESQE LVMKLIDTVG MTVKIPEKNM DIATSLIGSG 180
  181 PAFCLLMMES MIDGAVRMGM PYDVASVAAA KVMEGTARMV LETGEHPAAL KSKVCTPGGT 240
  241 TIGGLLTMED RGLRSAIARG VEEAANISAS FAKK

Type	Start	End	Confidence
Signal Peptide	1	20	0.76
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	274	0.96