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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.5667, orf1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKPKKHMSF TATNYVPTDD QSPDSSNLRN HANGTKNSTS SLDQLINSGT FIDHRKSFDW  60
   61 ANAHSSPTNR RRKKSNGSFR NQKSNKDPPS LPLTNRNLQT LIRRSSTIED PISPTAVAID 120
  121 IDKFTNEQRS FAKSNTWQDH YEDRDDEQYS YSEFGESNPS SEHSSDSTSL DDVCFPDFRE 180
  181 DVKTTSAWPD LHVLEEFIKE ELEEVQTDLE PTVNFGGNVV HSENEDATES TPLIDSFKVN 240
  241 EVESLGSENN PFQIRPTPIQ PWERSQQNIP PILKDVNKGK VDKEICRFTY FREDLSKTIH 300
  301 SPTMSGLIED KSKIYESLED FFPPTRSKPP SIHMKPDSVS STNLAPLTKS RPETPTPSSV 360
  361 NDSLSRREPF WLDVFDPTEE EMKVLSKTFG IHPLTTEDIF LGEAREKVEL FKSYYFVCFT 420
  421 SFDVVYEKRR QRAKEQEKKL NKLQDMYENG SDNGSTLESK SPFKLLKSLF SRKRRLSSYL 480
  481 EKPTSTSIKS QGKKIRDGEL SPLNMYIIVF KTGVITFHFS ATPHPINVRR RARMLKDYLS 540
  541 VTSDWICYAL IDDITDSFAP MIETIETEVN AIEDAILKMH SGESDSEDES EEESDHPENV 600
  601 FVFRKRSKSM VDHKSGPRLA KSVSSSSGTN SSRILGWKRK GDMLRRIGEC RKRVMSVMRL 660
  661 LSSKADVIKA FSKRFNESEG SSSEIGMYLG DIQDHIVTML QALAHYEKLL ARFHSNYLAQ 720
  721 INIDMTKVNN DTNDVLGKIT ILGTIVLPIN VVTGLWGMNC LVPGQDYEGL AWFWGIVGCM 780
  781 ALFSLVAYNY ARRVTGL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle