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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TIM50_CANAL
Protein type: Transmembrane
Type Confidence: 0.64
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRTQSRYLV RSILANHCVL PSTRMAVSPI LNQSIKFYSS KDNATDKSQE KEQPKSILND  60
   61 DMLARAGFED VDPKEETSNS EEQATKQTGR KRKRAQTSKD LQRERYANMF YLSALIFGVA 120
  121 GVGYMSRDWD SEKEQEEMDG KNVENGYTPK LMYERLSKRL GSLFTFFSEP AFENLLPPPP 180
  181 PEQYRRPLTL VVTLDDFLIH SNWDTQHGWR TGKRPGLDYF LGYLSQYYEI VVFSSNSQIY 240
  241 SDKTVNKLDP YHAYISYALF REACRYKDGK LIKDLSLLNR DLGKTVMIDV DEDSAALQPE 300
  301 NSIIVKKWEG QPDEYLISLI PFLEYLATQP VKDVRPILNS YKDKSNIVAE FAERENKLRE 360
  361 QWRKDHGGNN GKPNAGNFIA KLLGIPVPEP KMPLDIIREH GQLQYEHFQK YLQENAHKFL 420
  421 EEEQKLKDEF GKVTLNKLIT EGAPNAEEIA KVQQQRALEE AQKQQEGHK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle