YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46437007, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.34
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDDLTGVFK VTNLVVAGLC VVGGLSQLFY SFHAFVCGLY IIVFGGVIGA LEFTVPAEAY  60
   61 AYASFLFSFI GRGVFYTFLG VSLSGGSFFR GFAGLVVFGI GLAYVVLETV PSISPPDNMN 120
  121 PDGAVVGLDD EV

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.34
Transmembrane Helix	7	30	0.58
Cytoplasmic	31	31	0.30
Transmembrane Helix	32	53	0.83
Non-Cytoplasmic	54	58	0.51
Transmembrane Helix	59	80	0.85
Cytoplasmic	81	87	0.49
Transmembrane Helix	88	107	0.91
Non-Cytoplasmic	108	132	0.61