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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.13733, orf...
Protein type: Transmembrane
Type Confidence: 0.62
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFVLAAKPR FVYLTNKQLQ TIGKRLLTQS AKSSFKSSQC LLSEPNTMIK TASPKKNQQQ  60
   61 YRKSVALVSG VIIVGSYIVF NQSNYFNLDT LPSNLPPPQQ SKKLLQDNQK KYFSTSTSSL 120
  121 HQKDSISHQQ HKEGIFLLNE EQVSTKLRQF EESYTVNRGK GVTRYDICQL PSNSPIEDDR 180
  181 AEEIVQVPIL QDNNIKTSTD WMFFGVFDGH GGWTTSSKLR DQLIGYVINE LGTIYKPVQG 240
  241 EENLRYVPNS ATIDQAMKNG FLKLDHELVN KNIEKLLTDG NKAKAAELLM PALSGSCALL 300
  301 SFYDTNSQML KVAVTGDSRA ILGSFKDNHW TVRQLSIDQT GANPSEVARI ISEHPNEPKV 360
  361 IRNGRVLGSL EPTRAFGDCR YKLPAVIQER IYKQFFGRPL PNQLKSPPYV TAEPIITTTK 420
  421 INPNEHDFLV MASDGLYEML TNEEIVGLVV KWMEKADMIK PRKSWFGFGS ADSKLPEVKD 480
  481 VTNDKASKKP LNNKLGNSFL LEDNNVSTHL IRNALSNGGS REQTSMLISI PNPVSRRYRD 540
  541 DLTVTVVFFG KDTKGEDENG TLEVNWNATA GGLNSAKPKL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle