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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.10106, orf...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSNRNSFDR PLNYRMSIGE SRESIISPTH EGYSKFSSKT SVTHLPSLPY SQATTSPSSL  60
   61 QDNTEEVHGV NDDAYIEFDL SSPNPRNSTS DSFNRITPRV HTSSSISTPI QEHGSEDLVD 120
  121 EKLQTDECIL EKPKDEDEDF FKSGSNWKSM KTISDMDYYN EKGELEFNSK SGKDFIYDKN 180
  181 NQFGYTKIDT EEQVNKYAAL DQKTDFLFRP RGETQRNNAK YHKDDIFLEQ GDSDYDEDDE 240
  241 IDSGKTLTET KKMLTDSQKF AYIGIAKLIT VEMATDLAKV QFGTSSKIAK QMSGSQKNFS 300
  301 NWIEYVMSKL YDHLTVEGAE KEMIENLSKH GVEVNDLAKS LMEVGTKAVI SGGNKSFISE 360
  361 DFDLRWVIIC DMFLMLLSDG YYDARSRSLL LRFGASVDIT NLELFQFERR LIECLDMETK 420
  421 EKSIENKDEK LGDKSFVQQQ IKKNKNKRIA YIGLATLAGS LAIGLSAGLL APVIGAGIAA 480
  481 GFTTIGISGT GGFLAGVGGS ALITTSGVAI GAKVGSKAGS RRVGDVHTFE FKPLHNNKRT 540
  541 NLIVTVSGWM NGAMDDVRLP FSTVDPVMGD MFSLLWEPEM LQSMGQTIGI LASEALSTSI 600
  601 QQILGATILA ALMSAIQIPM ALSKLSYLLD NPWNVSLDRA WKAGKILAET IISGNLGVRP 660
  661 ITLVGFSLGS RLIYSCLIEM ARRGGYGLIE NVIILGSPIT VDIDQMSEAR SVVSGRFVNG 720
  721 YSKKDWILGY LFRATGGGIR AVAGLSPLDN VHGVENIDCT DLVEGHMAYR KAIPKIMKTI 780
  781 GWEVLSEEFA EIEEPDPEQG ERQRQLINEF DEARAKMEKE KNENIEPKGW RKWFKPKKKD 840
  841 WWDIYGQPEG TEKNDKGEYV DEKLEGNAVF DVDALVKEVN EIEHMVDENA KKATDPEVKN 900
  901 NKNEEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle