YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68472006, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIFISSTNV PLGYIVPQFP SLFWPVGSTR PSYLNSYLYY SWDIWRFTVF WSLLLSGSFY  60
   61 LIVGIIASMS SFTNKFRHNL KFGKRDMMAC VFIVVFYVFA GLIKGFIGGA IIGVIIAAIY 120
  121 QAGSLTMSTW IPLTWAMIQV LYDIVSSYST SQIIL

Type	Start	End	Confidence
Cytoplasmic	1	9	0.70
Transmembrane Helix	10	28	0.74
Non-Cytoplasmic	29	46	0.90
Transmembrane Helix	47	69	0.90
Cytoplasmic	70	87	0.84
Transmembrane Helix	88	120	0.83
Non-Cytoplasmic	121	125	0.47
Transmembrane Helix	126	145	0.63
Cytoplasmic	146	155	0.74