YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238882901
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKIKTFTPT SIPLAKPGLN SVRRLRLIPD WSKFKTIPQP PGYVVGTVND AYKPPSPEHY  60
   61 EGSYHWTYER AISITMIPLV MTPFVAGVEF PMIDSIFSTL LLFHCHAGMK SCIIDYIPKR 120
  121 VYGFWYGAAC KLLTLGTFVA MYGIYVLETT SNGLFNLVSS LWAA

Type	Start	End	Confidence
Cytoplasmic	1	70	0.81
Transmembrane Helix	71	88	0.73
Non-Cytoplasmic	89	94	0.45
Transmembrane Helix	95	114	0.61
Cytoplasmic	115	122	0.69
Transmembrane Helix	123	146	0.86
Non-Cytoplasmic	147	164	0.78