YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.13296, orf...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFANIDLEA QKEPLLKGKD NDANYTSPDE LDTIIGKTSR QLSVFGNLIS QFETQRKQIG  60
   61 TRRDTQELRN TIDVLTGKIQ EMDRAISALI ANLSTLINSK NSITASASIS NRHIVIEERL 120
  121 SRQYSELSKA FNKSTKVYQE KKRTTPLLTR PSKETEEQTK SEDTLATSQQ EQEQVQTQVD 180
  181 QDLIDQTELQ YHILLTEERN REIEQVTEGI MEVNSIFKDL SQLVHQQGEQ VNTIEDNILQ 240
  241 LHGNTQQASN ELNKANEYQK QKGKWSCILL VALCIFLLVI VLIVVS

Type	Start	End	Confidence
Cytoplasmic	1	264	0.90
Transmembrane Helix	265	285	0.94
Non-Cytoplasmic	286	286	0.91