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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.4736, orf1...
Protein type: Transmembrane
Type Confidence: 0.82
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLSNDQSPL LGGDSLTCWN KKQSGIKRNL SYLLNIITIG IIAYLCIFAK HSDNDDNTGL  60
   61 SLNPQKKKNI IMMVTDGMGP ASLSAARSFR QFRDKLAIND ILTLDKYLIG SSRTRSSSSL 120
  121 VTDSAAGATA FSCALKSYNG AIGVTPDKTP CGTVLEALKL QGYYTGLVVT TRITDATPAA 180
  181 FSSHVDYRFQ EDLIAQHQLG EYPFGRAVDL ILGGGRCHFL PTSEGGCRAD NRNLIKEYSD 240
  241 KWQYVGDRVS FDQLQGGKNV SLPLLGLLAN TDIPYDIERK DSEYPSLAEQ VQVALTALSE 300
  301 ATKDSEQGFF LLIEGSRIDH ASHHNDPAAH VREVLAYDRA FEEVIKFIDN SEIETVAIST 360
  361 SDHETGGLVV ARQVSESYPD YLWYPEVLLN STHSGDYLSH KVVHYKEKDN TKKFTNFIKH 420
  421 EILEKDLGIS DYTAKDVDLI IEKANNAGEL LYVLNNIVSI RAQIGWTTHG HSAVDVNIYA 480
  481 HTNSPAIKSK LLSHKAYDGL SGNHENIEIG AFIEYITGSD LNQVTQLIKK TEHSPDNNKA 540
  541 KVDDIFHANV L

YRC Informatics Platform - Version 3.0
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