YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TVP18_CANAL
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALADLALSN IWGGLSSDFK KKNFSLYGQW ISILTIFLCL ALGVANIFHL GPIIVFSIIC  60
   61 IVQGLIVLFV EVPFLLKICP LTDTFVNFVR KFDGNLPRCG FYLLNAVIQY LSLTLQATSL 120
  121 LVVAILFTIS SACYALAALK HQEYLKSSLD VTGTGSGGAL EAQVGEHVVR NVL

Type	Start	End	Confidence
Cytoplasmic	1	25	0.88
Transmembrane Helix	26	48	0.88
Non-Cytoplasmic	49	52	0.67
Transmembrane Helix	53	75	0.87
Cytoplasmic	76	93	0.78
Transmembrane Helix	94	113	0.56
Non-Cytoplasmic	114	116	0.54
Transmembrane Helix	117	138	0.86
Cytoplasmic	139	173	0.72