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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.4865
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLTHSTATD GTHIFHNKVS GNYLILTSGG GVEVSQTIPF VYQNLANAKT ISCIIGVIRL  60
   61 KFNSYVIIAD KHSVTGSILG HDIGFIESFQ ILPIGINDLA KKNLEELSYL KLLTTHLNNA 120
  121 TLYYSIDNKY DVTNSLQRQF NKSNTGGVVP VDDRFWWNKY LTQDLVNNHV GNDFVHPIIY 180
  181 GYFKSHSAVF NGKSLQFALL TRRSTLRAGT RYFRRGIDID GNVANFNETE QIFISDDNHL 240
  241 FSLLQTRGSV PVYWAEINNL KYKPNLVISS QSSLDATEKH FHQQVFLYGD NYLVNLVNQK 300
  301 GYEKPVKQAY ESAVNNLPEK LGQHVNYIYF DFHHECKGMK YHKINLLLDR LISLGYTSNN 360
  361 YFEYDLNANK IIRLQDKIVR TNCMDCLDRT NVVQSTIGRW VLQNQLTETN YLSSNNVTPF 420
  421 EKLNPQFNLF FQNFWADNAD AVSCAYSGTG ALKTDFTRLG KRTYKGGLND FLNSVTRYYK 480
  481 NNLTDGSRQD SYDLFLGKYK PFQDSVRSPF IDRRSPYNQL LPYLMGTSFL ILLAIIYFPK 540
  541 GSIWDWKNLF IMAFCILFNL KNLSYINSHG YQFVDWPKLI NLDFLKKNEI YTNGTTGKIV 600
  601 GIKYEEAENF TVNNKKKN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle