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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MMP2_BOVIN
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEARVSRGA LAALLRALCA LGCLLGRAAA APSPIIKFPG DVAPKTDKEL AVQYLNTFYG  60
   61 CPKESCNLFV LKDTLKKMQK FFGLPQTGEL DQSTIETMRK PRCGNPDVAN YNFFPRKPKW 120
  121 DKNQITYRII GYTPDLDPQT VDDAFARAFQ VWSDVTPLRF SRIHDGEADI MINFGRWEHG 180
  181 DGYPFDGKDG LLAHAFAPGP GVGGDSHFDD DELRTLGEGQ VVRVKYGNAD GEYCKFPFRF 240
  241 NGKEYTSCTD TGRSDGFLWC STTYNFDKDG KYGFCPHEAL FTMGGNADGQ PCKFPFRFQG 300
  301 TSYDSCTTEG RTDGYRWCGT TEDYDRDKEY GFCPETAMST VGGNSEGAPC VLPFTFLGNK 360
  361 HESCTSAGRS DGKLWCATTS NYDDDRKWGF CPDQGYSLFL VAAHEFGHAM GLEHSQDPGA 420
  421 LMAPIYTYTK NFRLSHDDIQ GIQELYGASP DIDTGTGPTP TLGPVTPELC KQDIVFDGIS 480
  481 QIRGEIFFFK DRFIWRTVTP RDKPTGPLLV ATFWPELPEK IDAVYEDPQE EKAVFFAGNE 540
  541 YWVYSASTLE RGYPKPLTSL GLPPGVQKVD AAFNWSKNKK TYIFAGDKFW RYNEVKKKMD 600
  601 PGFPKLIADA WNAIPDNLDA VVDLQGGGHS YFFKGAYYLK LENQSLKSVK FGSIKSDWLG 660
  661 C

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle