YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|45383402, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPAGGPSPA HTCGAVLVAA VLLQSVCVAV TYIYFTNELK QLWDTYSRSG TACLTGEELG  60
   61 DLIQNLDVVE SKDRVADPCW QVKWHLGKLI KKMMSRILQE NMSAINGDRT QALSRRDEPP 120
  121 QGPTLRIAAH LTGSSKRSSA SPHNYLSYRG IGHKIHSWES SRRGHSFLYN VELWNGELVV 180
  181 PQTGFYYIYS QTYFRFRENE DEDSGLLERI KNPKQLVQYI YKLTNYPDPI LLMKSARTSC 240
  241 WSKKAEYGLY SVYQGGVFQL KREDRIFVSV SNSDIVDMDK EASFFGAFMI SVKRQKTVLW 300
  301 RKQS

Type	Start	End	Confidence
Signal Peptide	1	29	0.95
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	304	0.99