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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18252231, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKLSCLLSV EVVAAQNLPA SMNGLRLGVC VRKKETKDGA VQTMPCRVSQ GSADFEETLF  60
   61 IKCHVYYSPA NGKGSPAKFE ARPFLFYLFA VDAKELEFGR HVVDLSELIQ ESVEKMNYEG 120
  121 ARVRQWDMNW GLSGKAKGGE LALKLGFQIM EKDGGAGIYS KQGEFGMKPS SKPKNFANSF 180
  181 GRKQSKTSFS VPSPKMTSRS EAWTPASGVE SVSDFHGMEH LNLDEPEEKP EEKPVQKNDK 240
  241 PEQRAEDDQE EPDFEVVDKG VEFDDDLETE KSDGTIGERS VEMKEQHVNV DDPRHIMRLT 300
  301 ELDSIAKQIK ALESMMKDES DGGDGETESQ RLDEEEQTVT KEFLQLLEDE ETEKLKFYQH 360
  361 KMDISELRSG ESVDDESENY LSDLGKGIGC VVQTRDGGYL VSMNPFDTVV MRKDTPKLVM 420
  421 QISKQIVVLP EAGPATGFEL FHRMAGSGEE LESKISSLMA IDELMGKTGE QVAFEGIASA 480
  481 IIQGRNKERA NTSAARTVAA VKTMANAMSS GRRERIMTGI WNVEENPLTS AEEVLAVSLQ 540
  541 KLEEMVVEGL KIQADMVDDE APFEVSAAKG QKNPLESTIP LEEWQKEHRT QQKLTVLATV 600
  601 QLRDPTRRYE AVGGTVVVAV QAEEEEEKGL KVGSLHIGGV KKDAAEKRRL TAAQWLVEHG 660
  661 MGKKGKKKSN IKKKEKEEEE EEMLWSLSSR VMADMWLKSI RNPDVKLH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle