YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67539616, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASAARLSPT ANLLRKSRLF ALPQALTPVE APTSRPYAES DTATRPHPIR ASIVTPASSL  60
   61 ARGDWGLKRP LPAKSTSQKS SRPVVRINEL DTFEHVTDFE SASDHTVTLE KFQELHMPIS 120
  121 LPAKVHFSSN MVTRHHSVFD QDVDNTEASE NIDQPDIKQI RHTGPWLSGL TDAEFAAYLK 180
  181 KVQKQKPQLV FKLRERFLEK RMAEIRNQAQ DKGEDLENLP APTEEDFQTY LKTLRADPFA 240
  241 LGPVVYELLD LPATAPVPNE RMPKKYYQSP PSKMASPEYV TSGPPITHPS AGLSYARSHA 300
  301 SIYNHPQYGP QAHPRPVEAR ILRPRGRVRG KSGKPILGVG GIAVEDTSTI AFSEQGGPAG 360
  361 LSAFDPSIPG GARYHVTPIR AFVGSTGRIS LITNRATTNA KAPYGIKDHK AAKSSPQRYT 420
  421 SFDLRASDRR VPRLDRARTF SKPATGFEQP EKSTEDVAKN LLRTIKSQ

Type	Start	End	Confidence
Signal Peptide	1	31	0.86
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	468	0.99