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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49097460, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPNPNDVTID IPLTSVSSRG QTGARNNSTN IPNSPSGGYS AGAEHNGGAE KGGLTSSPPS  60
   61 SSLGFGHRRR RTINDKTGLP AEEPEDGTVT RMGRFYQAVL NFSTVTRYLI YIAPLAALLA 120
  121 IPIIVGATAA EDAKIGGVSL PWFFCWVEVV WVSLWVCKLV AKVIPFVFQF VCGIVSAGTR 180
  181 KYALILRNLE IPITMVLWMI VSLVTFLPIM VYNPRNKREG DTETKSWEKS VKNVLFAFLV 240
  241 CALIFLGEKT LVQLISISYH RKQFDARIKE SKRNINLIGI LYDASRSMFP MYCKEFREDD 300
  301 AIISDSILLG GPETGRPGHS RSNSAAPLRF IRGVQQNVGR IGGKITGALG DVAHEITGKQ 360
  361 VFNSSAARSI VSEALERRRS SEALARRIWM SFVIEGREAL YLDDIMEVLG AGKEAEAEEC 420
  421 FTMLDRDGNG DISLDEIILA ISEIGRTRKT LNHSVHDVDQ AIHVLDNLLA TIAFIIAVLV 480
  481 FVSFVTSGFG TVIAAGATSL LSLSFVFATT AQEVLGSCIF LFVKHPFDIG DRVEIDSKPY 540
  541 IVQRISLLYS VFRNVNDNRV TQIPNVVLNT VWIDNYSRSS AMQEKLTIEV NIDTTTEEIQ 600
  601 ALKDEIETFV RSPDNKRDFH PDVDIEVSGV GALDKLELTV GLFHKSNWAI ESVRAARRSK 660
  661 FMVALVAAVK KVPIRTPGAA AEDAAAADGD RPDDKPDDAE QPPARQSSIS EGIRHPTVPD 720
  721 DSFPSDSKST GVDLGRPGSV QRRGASATAA TGNNSAGSAY SETTLNNTVS EPYQRSFTPN 780
  781 TGDRDTDHYH GSMSSPVTER HLGVSHDSIA RKASTASTGR RRAGIMTTAN QSLASPTTMQ 840
  841 SESALPPHLQ PPPPLQPSSS QYSQQYPQQQ SQSPYSYTYS ERYDQPESSL QPLEHTTSYN 900
  901 QSLPQVYEYA PAADRNSLEG HSPHVDPRHM TEEQRRNYES RRL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle