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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PALH_EMENI
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDDGRLAPR QIWARPTSTT TRSYVPGCTP FLLPSDGYVY LNRTYSISLG ENAIYDPACT  60
   61 STPTTTEHAG AALDIHDPFY ASVTPLLYAM GCATVVSYLL VIILLITPRT FYVGGPGGGA 120
  121 NFLGRHGMVS GSYSNNSSVV GVGGRPWLQK VAALLVAISL TIATADSFRV AEKQYDHGYS 180
  181 DAEALTSEVI DGTEIKVVRI ISSTFLWLAQ VQTLIRLFPR HKEKVMIKWA GFALIVLDTI 240
  241 FAILDKFLVK TNTTRPRLYE DAIPALSYLF ELALNLLYAA WVIFYSLSKH RFAFFHPKMR 300
  301 NICLVALLSL CAVLIPVVFF VLDIAKPEIA GWGTYIRWVG SAAASVVVWE WVERIEALER 360
  361 DERKDGILGR EVFDGDEMIE VTPSEEVDWP RQQFHGHDRG GGTGMSSAWG GVMGLAHRPL 420
  421 RPRGGRITQT QREAEGATAA KSRKRRSARP TPPPAAVTPV SRADTTSAAS TVYNVHYYPV 480
  481 SSPTPPVAMP FMEEEDEGSD GDGEKELAVV QNQQSSLPTQ DTYTEPRRQN SPQIVNVDNR 540
  541 WRFILNPFKN RHAALPREVA SAQAEEEGFL SPDDQAPRQG DEENPHYTPR HRGLFSFHPM 600
  601 SDGASRRQSG ADQPLPVTVI PARRRGQDTW SPQWFTNSNL VDRSSSRRTA SRPRDQRMKV 660
  661 IQPQVQSAAP WTAADMEASF SSMDYELRYD PEAAALVSED IPDHHSQPTQ ADSPAHPTMS 720
  721 GGNGPSGGET QSALDTGPGI EGSVNEGSVI EGPEESHSQR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle