YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49092754, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNLFKRMRK LKTKILNIRV GTGAAIFPSA ANATAEYPAV TRLHLTYARK IYGGHQGARH  60
   61 FWRQCLTRLK YHNPGVPITV KQTDNQDGPA SLTVYFAEKL SNAASLNAAA KDEHAPEPSA 120
  121 TEKTATVDVR NLTYQDIWNK VKNMTGAQEV PPTEEEKAEL AKFEQMAQQS VKDRARVAAI 180
  181 RQAKLDHKRM STYNIMTTKT RLQASLSRAA AREAPSLGQW LEFPGYQLAE TVASLSEDMM 240
  241 RRALDAGAHG IMIPMCEIAE QARFIVARCK YPPAGIRGAG AMFAHSAFHQ NPREYLTTAN 300
  301 DNIVIIVQIE SRKAVENCEE IAGVEGVDML FVGPNDLASS MGHVAFEHPH IAEVQDAIAR 360
  361 VLRAAKMHNK YAGHFALGAE EVARRWKQGF DFVNCGADIV ALSAWMGNEM GKLKGIIGS

Type	Start	End	Confidence
Signal Peptide	1	33	0.96
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	419	0.99