YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67528206, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.68
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLRFPLRPW ALRMLNSEVA SFPLSNPTSR MFRRPISLAP AQRQLFSIRK QLPSLRTLQQ  60
   61 FQLQSTASRG QIRRTFRTYR PRFNNNKSVG PGYTYQAPNA TPSLSQRLKT LSREYGWSAL 120
  121 WIYLFLSALD FPFCFAAVKL LGADKIGHYE HVIVESVKGA VNKVWPGAFK ESEEQSEDED 180
  181 FGAQAGGKKK GPVEEASLWT QLALAYAIHK SFIFVRVPLT AAITPKVVKQ LRKWGWDVVK 240
  241 GKPKAK

Type	Start	End	Confidence
Cytoplasmic	1	116	0.51
Transmembrane Helix	117	138	0.58
Non-Cytoplasmic	139	246	0.71