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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|27543904
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.10
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWDHLDIDK PHLAYMILGG FTGLFMLCSL FVKEKLYIGE ATVATICGII FGPHAANLFN  60
   61 PIEWGNVDKI TLECSRIVLV VQCFAVGVEL PKAYMERHWK SVTLLLLPVM TWGWLITSLF 120
  121 IWSLIKPLTW LEALVCAACV TATDPVLASS VVGKGKFAKR VPRHLRDLLS AESGCNDGMA 180
  181 FPFIYLSYYI LHYRPDANAV SLHWFCVTIL YECVFGAIFG FTIGYAARHA IRFAERKQLI 240
  241 DRESFLVFYF VLALFCAGSG SLLGMDDLLI GFAAGVGFSN DGWFTEKTEE SHVSNVIDLL 300
  301 LNLAYFVYLG AILPWADYNN ADLGLDAWRL VVIAILVIFF RRIPIMLLLK PIIPDVKTWR 360
  361 EALFAGHFGP IGVGAIFACI LARAELETGS TQPVVSDDLP KPHTHNYYVV QIIWPLTTFM 420
  421 VVASILVHGS SIAVFTLGKR INTLSITLSY TQANEEGPSW MNRLPRVQSL AKGSMSFRKA 480
  481 DDSEGSSPNE PEYPPGTLPP IGLPGNFLRR VQEDDSGSPT GRVSTRRGRR RRRKADGAGG 540
  541 PISQSAIAPQ RPSEVESEDA EKTVGDTEST TPSPPPATWR DAIVNVYVEG HDLIYEDKDG 600
  601 NVLKTEHVGH MSAEEQKRHV QAERSKLNLE FQQPPDETKP GSSEEQPTAG ERLEKSIGDK 660
  661 AKRRRFGQWL GFGKQRSENQ EQKDAKTEKK SAEEAGPKAP KGKGRSAHAY QFGNTIIVED 720
  721 EDGEVIKKYS IPSVDKSEAK GNAPVRRGLV RMGTWFGKEE EGEPSQAGKK THENEWLADD 780
  781 GLRFTLANDE TVGKHGISHK GRRMTKQEFA DQIRNLGPKA RQSIVEDSDA PKRVKDAARD 840
  841 DAQQADKRER RASAAGSAHQ TGAPHDDLES VSSGSDDEPD SEEGPGPNVA ETLARIAAGT 900
  901 ATGTAADERR KDLSPGTSSR ERSPRSRRDS DDDGTERVPP SKLREAAGLA LPQQALDLDD 960
  961 TGETPAERRR RLAALGEYSD SEDDVDSDAV SEGEDDHNNR KGPGKISFAD GTNLEAGSTY1020
 1021 DREGNGLGSS RMHSRRSRSR ISWGGEKGRE 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle