YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67901380, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQEYTPGAFA DRDDPTPPLR GRQTASTDDQ ISSRHERSVS SIRQSMQDRL LTKILEQVVP  60
   61 VEDVHDESVS VGAKPVPPDA QRPAFSLPLM GNNFRRFNAR IGIVFHFQEQ VERLFAWKQP 120
  121 SHTFSFLFVY SFICLDPHLL VVLPIATILL FVMVPTFLAR HPPPPSTSTS SITPYYSYQG 180
  181 PALAPPKTIK PAPETSKDFF RNMRDLQNCM ADFSDLHDSA VSALAPMTNF SNEKLSSAVF 240
  241 LSCTVLTAVL FLTAHLIPWR YIMLIGGNAA LLSKHPNIQE FLQGLAAELG SEELTQVPSG 300
  301 KAPAPHMPFM KLLDDISLDS YPEEREVEIF EIQYRSLAPY AEQDWETFLF SAVPYDPLSP 360
  361 SRIAGDRPKG CRFFEDVQPP AGWAWKSKKW ELDLDCREWV VERMITGVGF EVPGSPSESG 420
  421 AGSDEIGGWV WDLPSASSLR SDDDVASALG YGTLGQIGEK KKGKKKGKER ATQDYEEKGS 480
  481 PGSNVMGEWR RRRWVRIVQR ISMPAEKEKA KSRGNNA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle