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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49109000, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDVAALEAE VKEFKLQVDP DNTELQSLKA ELEELINLTE TSIAELRPAT PQPTTAPAKL  60
   61 KGSRDDNASK PGYRNSTAEQ TDDNTNSGPA SFSVNEHVLA RWVSGDNSFY PARITSITGS 120
  121 SSNPVYIVSF KSYGTVESLT AKDLKPISNS DSRKRKADGS PGSSNHSPVP QPPHASVISA 180
  181 AADINPALAN QARKEPSKAT DGPARPAKVS RKVKANKELE AGKNKWKDFA SKTKIGRKDS 240
  241 MFRTGEGVNA RDAKDAILIR SNVLVTSPVR NVAPSDVLMS ANTRHATVKS KSAKGRLSSI 300
  301 GILCPEQVLA ENQRLRAQSA SSANTPEARP GAEPSHSRLC ADGSDEVESE DEGNTGVRNP 360
  361 IIGDRAWFHA YDPSAPPIFV GEAACTAFAT RFRQFLTGSN ATAHIRRTQY VKEENIALAN 420
  421 AGEIRWPSLQ QARLLVQIAI RQISCIYHVL LRKSTLDKLE EIYRTGDFEC TVNQCKFFAL 480
  481 FAFGEAYSMR SEPASGSRVP GTSYFARSLS LVQVLPERTS ITHLETLLLL SLFSYYLNRR 540
  541 HSAYVLIGSA MRLGLCIGLN HNIPESQLID PVERQHRVRI WWTIYIFDRM WASKMGLPSQ 600
  601 ILDDDIHLDM PSSTLPKQIY EEQFTDAEYI KANINLARIV GETTAKVYSR RKYNETFLQR 660
  661 VQKLLKALKN WVDTLPEHLR LNVEDPEMNT KQVTSIHLAF NQVFLPGLRP YPTKSTNADI 720
  721 QCVILTTRPT LLHLLRLTET GNTTTSSTTT TKETISQPLQ TLGEACIHAA RHSHSLILTK 780
  781 WINGSLPVFG YFHAHYLFSS SLVLAMSAFV PLPLGSPADL NAFETGLEVL ASMSENGNLA 840
  841 ASEFYHNLVR VKECLDSWRA KKGLANGSGS ASHNRGSQSQ SQGPFGTATG SSAPLSPSNS 900
  901 LVRPAGQGQN SMPASLSGPI PGLLPTYNNT SIIAQNPNHN PTSSAPCALD GNDSSQSQVQ 960
  961 GRVAGGFTTA MAFMEPTMQD FLAQTDLDLG LLNPVETFMD HIKLGLEVTM EDPEKVASSS1020
 1021 SSPGTRSASP SPSTVRKPPN THTSGFLLPK WHKLIILFVV SWMTLAVTFS STSLLPATPE1080
 1081 IALEFNTTTE ILNITNAGVL LAMGLSTLFW GPLTILIGRR LSYNIAVAVL VLCSGLTAGS1140
 1141 RSMGMFTACR ILGGFTGTSF MVSGQTVLAD IFEPEIRGTA VGFFMLGTVT GPAIGPCIGG1200
 1201 IIVTFASWRN IYWLQTAMAG LGLVLSLIFV PEVQQDISSS DTQKQKEKEK ITLRYALKVF1260
 1261 NPVRVFRLWL YPNLLFSFLT CGLLATYLYA LLSSARTIFN PRFNLTSALV SGLFYLAPGS1320
 1321 GFLVGSVLGG RLSDLTVRKY IARRGFRLPQ DRLNSGLIML SLVLPGATLV YAWTLDQEVG1380
 1381 GMAMPIIAGF VGGVGLMGSF NGLNTYAAEA LPSHRAEVIA GKYIIQYIFS AGASALVVPL1440
 1441 VDKIGVGWTF TISAFFTLTG AVLVLLIARW GIDMQRWVER RVLLPEKS

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