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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40742940, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSRTRRDLL SPRDYDDDAE SLRSPLSEQD SDSEDDEFLA QSRTTLELAE HDRAVLDEEE  60
   61 ELEKLLTRSG PTHDIRRIFS PNRSNVRIGK KEEARRQRRE KERIARKARR ERRHGDDEEM 120
  121 YEMEEGHPED ESSLLSSSSS DLDERIKEQY ADIQNRQKVS WQKMSLVFSA MFVLFLILLL 180
  181 GAYKASAGFR ASHSSVKTLL SNGTALFAPT TILISLDGFR ADFLNRGLTP TLNAFISEGV 240
  241 SPPYMHPSFP SVTFPNHFTL VTGLYPESHG IVGNTFWDPE LQEQFYYTHP TVSMQSKWWN 300
  301 AEPLWMTAEN QNVKSAIHMW PGSEAHIGGV EPTYLDKYNG SEALSRKTER ILQLLDLPGL 360
  361 EQESTSSPQR PQFIAAYVPN VDADGHKYGP NSTQIRKTIS QADNMLADLF SGLRERNLTD 420
  421 VVNIVIVSDH GMASTSTERL VQLDDLIDLN LTSHIDGWPL RGIRPKRPEY LKTLQDQLER 480
  481 VASQYSDAIE IYTRENMPER YHFKNNDRIA PLWVIPKTGW AIVERPEFDA QAALQNGQFY 540
  541 HPKGIHGYDH EHPLMRAIFI ARGPAFPHPP NSRVDAFQNI NVYNILCDSL GIKPHPNNGT 600
  601 LRLPLKPNGL HSDEDAPVLD SPSDPPATQA TKQIATISSS ATSSAVSSTT VSSTSISSDA 660
  661 GSVLVSPSAK PESDAEDEPD ADWWESIWDK VEDIKDWAND LLDDIKDDFS QSR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle