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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40743485, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTNPFLVPP RTSSINVRTG DAGNNRRDHK TRSMHKAQKI LGTMDIALDN DYHRPPDKRA  60
   61 SRSAGYLNAR ETTHQHEDEQ EASRPASVRV QSSSPQLSQE YRDQADSTSA FAQLSRKLHL 120
  121 PGSSSGMNAR SGSRGNADPS ASPGKDHAAA ADSRTVPEGG LNPAFKQPKG PMKDTKRKGR 180
  181 PPRIDLSLLF PKPQTNTTTL LSPQRMVTSP SAVSFTSELP AEHHTLKAYK SESRLAGKRL 240
  241 TKAPPRQRAL SRPEENMLPL DDLSSQTAPQ RPPSVYNPTM ERTVRTTDMD RALMKNLDAA 300
  301 PTPRSPERAF NYNQMNFSLR GREQLLRCDS SFATDKSGES AHSSQRTLRD PALAKALKDG 360
  361 PELEPSPFHF GLPDRAPRSK GNSMSKKSSR STLKNRDLTT SSVLCLSSSE DEDDEPQPAK 420
  421 SQSVPAKNRR DSVSTYGGYE AEICTAAAAH TIRGTLRSVE RPSSSTTKSS RASSKHLRAP 480
  481 PLANGNNQSR RSSGTPAPLE PDFLHSDPIF DQSKVQTRAS GLSQKEVNRR SRLIAVTRQE 540
  541 ERLLDLMRQR QGKITPSILN ENIDVDRRSM FSNFSGPSRN SYYCTDTSFL RLSACIPPDS 600
  601 ARASQVTMKY KDTAALTPTA TDFEADETAT KSVPSPQASL SSKSLPSPAT TSTSPLTPTL 660
  661 PIHRFSPLPS QKPPPRLPPP PIPDLQRSHS RRRTDSSGAI VLDNPTEDTR QSGEFPVWAL 720
  721 GWANDNNNLT ASVSLHYSLV MVNTLHVRLN QSAKRVMEFV PLEGNRPIPL SAIDMGESVQ 780
  781 RRSSGPGAAW KHGSWVLLTI QYTTFVLLVH YSRMMPPTGG KRYLTSTAVF FNEVVKLAIS 840
  841 LTLALYEVSK SAPPSVPATS LLSTLAAAIF SGDSWKLAIP AALYTLANSL QYIALSNLPA 900
  901 ATFQTSYQLK IVVTSVFSLV LLQRSVPLRK WGLILLLIAG VALVNVPVIT SDELSLDNGA 960
  961 THFDFPRSLE EWKSVKLQGQ GLRKRSATYE GIEEDILTAT PSMDRIVGIL ATLGSCAASG1020
 1021 LSGVYFEKVM RDSAKSTSLW VRNVQIAVYS IFPALFIGVV FLDGEKIANG GVFEGYNWVV1080
 1081 WATIIVQALG GIATPFFVGP AFADARNVAS ATTIILTSLG SVWLFDFEPT VTYLVGTFAV1140
 1141 LVATYLCELP SSDPKLRPPP IRVARYEKES KSDQASPSSS SPQEISIKLP TTPFLSDAGI1200
 1201 STSRPTSPGV TRSGASRSSN GGYF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle