YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67524621, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLLESHLEQ IMLSSNAIAE LPFPQPRIFT NALLGSHDIT ALIRDTEAHE RALFQSDPTV  60
   61 KAMSWAFQAS LPRFLTVALS PVAGAQDKIA SLRYRNQVIS ESIAELEERV ARNASELESM 120
  121 SHLHDDDYDE LDNASSPSAG VLDVTDADIE RELKEIRELE RRKRNLEDRV NGMERDLGGL 180
  181 SHARDIRAVT TFSLPNKNAG KFVGSGKQRY CSYRANEEPR INNRGTYIRS KWQRKSPFSG 240
  241 NSAGRGILVI VVATFESMLI AISAA

Type	Start	End	Confidence
Cytoplasmic	1	241	0.61
Transmembrane Helix	242	262	0.75
Non-Cytoplasmic	263	265	0.65