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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49092156, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLLALTSAL ALLGKAVHGL DADGWRSQSI YFLLTDRFAR TDGSTTAACD LAQRRYCGGS  60
   61 WQGIINQLDY IQDMGFTAIW ITPITEQIPD VTAVGTGFHG YWQKNIYGVD TNLGTADDIR 120
  121 ALSEALHDRG MYLMLDVVAN HMSYGGPGGS TDFSIFTPFD SASYFHSYCA INNYDNQWQV 180
  181 ENCFLGDDTV SLTDLNTQSS EVRDIWYDWI EDIVANYSVD GLRIDTVKHV EKDFWPGYID 240
  241 AAGVYSVGEI FHGDPAYTCP YQDYMDGVMN YPIYYPLLNA FKSSSGSMSD LYNMINTVAS 300
  301 NCRDPTLLGN FIENHDNPRF PNYTPDMSRA KNVLAFLFLT DGIPIVYAGQ EQHYSGSNDP 360
  361 YNREPVWWSS YSTSSELYKF IATTNKIRKL AISKDSSYLT SRNTPFYSDS NYIAMRKGSG 420
  421 GSQVLTLLNN IGTSIGSYTF DLYDHGYNSG ANLVELYTCS SVQVGSNGAI SIPMTSGLPR 480
  481 VLVPAAWVSG SGLCGLTNPT SKTTTATTTS TTTCASATAT AITVVFQERV QTAYGENVFL 540
  541 AGSISQLGNW DTTEAVALSA AQYTATDPLW TVAIELPVGT SFEFKFLKKR QDGSIVWESN 600
  601 PNRSAKVNEG CARTTQTIST SWR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle