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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49087364, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.39
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFAAYAGAS VALATGVFLK ALHQRANFYS ACVYLSQSSA NLMILTNVCL LAVGFLLFWL  60
   61 QRLLYGPLRP IETEQLYEKA WFAVTETCLA MTIFRGELGA WFLVMFVSLL VGKVWGWIGE 120
  121 GRVEFLEQQP PANPLLFHTR LVVSLLLSVM FDIFMLKYCI DTVLEQARPD MMVMFGFEFA 180
  181 VLTILSTSTA ARYSISLVEI YINRQQMKAR IEERRQEIRA AREQALAEHA ATEDQTANLD 240
  241 LPDENDINEL ELDIPGWEEK GRWVFYLDLL TDFLKLTVYL TFFAILFTFY GLPIHILRDV 300
  301 VVTIRSFGRR IMDFARYRNA TRDMNDRYPD ASAEEVAREE VCIICREEMT HWQPGDRPVS 360
  361 RVSERLRPKK LPCGHILHFS CLRSWLERQQ NCPTCRRPVI APPRNQGPAG VNMGQGNGGA 420
  421 GQQQNMPPGN QPVNQNPPAD GLPRARIYQF GPFRIGFGAG RGDLFNNLHQ QIHQGNGPWQ 480
  481 PGMNPNPAGA RQIGFGFGFG RPPLQQAPAP AAPAATQPVP TPTSNLPNLQ NQLLQMEQQI 540
  541 ANEINGLRIA ADQLNLVRLL QTELQRLRTL QSQPLNNQTN IPQNPSPSIP SISPTTTRPR 600
  601 IVSNPETAPM GAGDPRLPDG LTLPQGWTLV PLHSVQPGLS ASSNVAANAS SSEAEHSAPP 660
  661 SEGMLNSQVP TDTESQRPSD RSDAATSGSS GLPNWQSSPF SHSAADSTGA ISQQSENLSS 720
  721 EAGLRAPLAP SKTEQVETPL SEHGAETRIE TQTSDSRSKG KERVATVEDA ADDET

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle