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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40745983, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLCKPTMQY SVTSSAFLRC LKQPPSIRMA PNYRLFSSYG NAHRSSKRDM QTATAYRPHT  60
   61 LPSSFPISPS PGAKDSSVAA DFVHYREPAQ RNSQIQNTEL KADVNQGEPQ KSKPVESTPT 120
  121 TSKPAEKPRR KLRPRKAAMK LTPIAVEQLR KLLSQPEPRL IRVGVKNRGC SGLAYHLEYV 180
  181 DKPGTFDEVV EQDGVKVLID SKALFSIIGS EMDWQEDKLS ARFVFRNPNI KSNGVRVRSV 240
  241 FAPNPPGPEN NTLFITVRFS ASIPDLRLDI DYPETTTATG LKQAIRARLP PSLSSHRLRL 300
  301 IYAGRGLEDT TPLAVSLKLP PPSNRFSKSL SAPDKDAASE DTSNQGISTK RDKGKAPIRE 360
  361 PPRLYVHCSI GDIVLSAADL EAEAAAVSTL QIQGHNSHRS NDEKTKDSHS RQQSHDGQAS 420
  421 SSTIPAPRGF DRLLSAGFTA AEVTALRSQF MATLSVSRTR DTMPTGAELR ELEDRWLDEG 480
  481 SSTMATGGTV AGGEGVSFTD DDGGFGSNSR GAIDDMLWGA VMGFFWPVGC AMWLRREEGV 540
  541 WSWRKGLAVF VGVVVNIAFG AMRIMG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle