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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67517109, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTDYTYDEQ GQFFPYFVLT LTGLVTFPLT YNLLKPPKDL ENTAPRIRSD FKPEHEDLIE  60
   61 AQKRKRLRKE RRIKRIVTVV LGYAIMAYMA YLIVITARAS PKIWDPYDIL GVSRSANERA 120
  121 ITKHYKRLSL LYHPDKIRPD PAKNETIELL NERFVELTKA YKALTDEEVR NNYLQYGHPD 180
  181 GKQSFSIGIA LPQFIVTEGN GKYVLLVYGG LLGVLLPYIV GKWWYGSQRY TKERVYVASA 240
  241 GNIFREYKDD ITDGGIVNAL SSGDEFKEAI PAQKAETGLA KLEQKVLADD NKFLTDQERE 300
  301 AIKGMDDLSR RKALALLWAY LGRVELDDPI LNGEKYEVAP IALSLNEAFT AVSLAFGNLR 360
  361 PLLGSFRTSQ NLIQAVAPGS SPLLQLPHFT DKVVRSIEGE DVKNHFSVQK FMDMPEEKRR 420
  421 SLTVGAGLLS EQQYTTAITV AKQLPVLKIS KAWFKVMGEK VITPSSLVQL VVKARFIPPG 480
  481 SKDVPEPDPA DLEDIDPEEG DLDALMGRGP SRNRSVKFAD GQNNVNKKVQ PPLAHAPYLA 540
  541 LDHSPRWQIF LVDGKQGKIA VPPFTFTTFE KPMLDEAGNP TYNVQTLRMQ FQAPPQVGDF 600
  601 HFVMHMVCDS YIGLDSKLDI TLHIDDPAKA AALEEEDDIS EPDEDSIAGQ MQALKTGQPP 660
  661 KKKAKKPADD SSDEESDTEG DEGDTSDTNT ETDVDD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle