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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40746952, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRWRLPGARS TLPASVALLL LPVLVAPQQL QEQPLHDVPV PSAVSVPLRP TAHVPANANA  60
   61 NPSPPALNVK SNDASALATL ALAGSGRAVR APPIQASSSS ASAGLAPQLH ARSLQDWEVE 120
  121 DFVLLATVDG TIHARDRKTG APRWALEVPS SPMVESYYHR ANRSSFDEAK PEDDFIWIVE 180
  181 PSQDGSLYIF SPDPNAGLQQ LGLTVKELVD ETPYSGTEPA VTYTARKETT LYTIDARTGS 240
  241 ILRVFSSRGP MPSAPECRKV DDFDADVDEE CESPSGTLVL GRVEYAVAIQ NTETGDPICT 300
  301 LKYSEWTTNN RDVDLQSQYF RTMDQSHIYS MHDGVVLGFD HSHIERPRYT QRFSSPVVRV 360
  361 FDVARPVNID NPEAPKPLIL LSQPLQPPDP DYGSLDDRND LVFIDYTEGG GWYAMSEETY 420
  421 PLVTGRAKMA QYYEKDYFRH GQPLMSLTPE QQRDALAGVH ALNSPRIPRR QIPSISGSSS 480
  481 AEFSNGTPRE IIRSPSELAL PPALRHSTII RKSWDNAADI VVMLILLFFA PLSTPSTPIV 540
  541 SGSMKRESST VRAVNDVTVD IKVDGPPVDG EMTPKPDRTR DSVEPDATPR VRIREPSRGP 600
  601 DDDKDVEELS LQDGEKKKKT RKRGSRGGKS HRRGKKKIES EKEESDHAPG TLQPPAGPDA 660
  661 GLALTRTASN EVFEADGVIQ IGRLKVFTAD VLGHGSHGTV VYRGSFDGRD VAVKRMLVEF 720
  721 YDIASHEVGL LQESDDHNNV IRYYCREQAK GFFYIALELC PASLQDVVER PDAFPQLVNG 780
  781 GLDMPDVLRQ IVAGVRYLHS LKIVHRDLKP QNILVAAPRG RIGSRAIRLL ISDFGLCKKL 840
  841 EDNQSSFRAT TAHAAGTSGW RAPELLVDDD KSPVIQGSES QHTESSEPAV VDPQTNRRAT 900
  901 RAIDIFSLGC VFYYVLTRGC HPFDKNGKFM REANIVKGNF NLDELQRLGE YAFEADDLIR 960
  961 SMLALDPRQR PDASAVLTHP FFWNPSDRLS FLCDVSDHFE FEPRDPPSDA LLCLESVASD1020
 1021 VIGPEMDFLK LLPKDFKDSL GKQRKYTGSK MLDLMRALRN KRNHYNDMPE HLKAHIGGLP1080
 1081 EGYLNFWTQT KDDALQRGLK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle