YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75859136, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGPTIQDRT SEFQAILGQA QKRAASSKVG SQRQALLTDS QRQQANGSPN GTAAGGKRRS  60
   61 EFARRAAEIG RGITATTAKL RRLAELAKRK TLFDDRPVEI SELTYVIKQD LASLNQQIAS 120
  121 LQALTLSQHP KSNRSKTDQE GEHNDNVVVM LQGKLADVGA NFKDVLEVRT KNIQASRSRT 180
  181 ENFVSSVSSK SQAALDPQRS DSPLYPSGRR TPQPGGSSDL LTLEPSNPSP LGRPSMQSDQ 240
  241 QLLMMEEAES SNSYIQSRGE AIDAIERTIN ELGGIFGQLA QMVSEQSEMI QRIDANTEDV 300
  301 VDNVQGAQRE LMKYWTRVSG NRWLIAKMFG VLMIFFLLWV LISG

Type	Start	End	Confidence
Cytoplasmic	1	322	0.88
Transmembrane Helix	323	342	0.97
Non-Cytoplasmic	343	344	0.73