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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49124322, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLKMRPSSR DEFAIAIICA LTLEAEAVED LFDEIYDRLG EHYRKEPGDD NAYVNGRIGY  60
   61 HNVVVCYMPG MGKGSAASVA SSLKISYKRI EVALVVGICG GAPYPSSGGE VFLGDVIISD 120
  121 SVVQYDFGRQ YPGGFEKKLG VRDTLGRPNR AIRSILASLQ ARRSCKDLQD KLLQHLQAIQ 180
  181 KSPSDWQFPS IDDILFEASY QHKHYGFTSP ACPCLDSMSK DTCKTAVESP CTSLGCDMDR 240
  241 SEGVVGFEME GAGVWDNISC IIIKGVCDYA DSHKNKAWQV YAAATGAAAA KAFLEYWEPT 300
  301 AREDSNKFRI PLDLSAVPAI EEFIGREEEL NCLWDYLQPA SSQRRKVAVL HGLGGIGKTQ 360
  361 LAIHFARKHK NKFTAIFWLN SKDQSALVSS LSSCLSQIQG QLIEDQAVNE EEAVQRANQV 420
  421 LQWLARPGNT RWLIIFDNID QYSPAQGHGH CGYDIYEFFP KADHGSIMIT SRLQGLTELG 480
  481 KSFPVRRLMH KDATQLLFQS SGFSAKDITQ MGAEQDLINL ASLLDGLSLA IVIAGAFMRQ 540
  541 TGTTFKEYLE LYQTSWFDLQ SQSAPTRQYQ QGNIVQTWII TYKEIQKRDP TAAKLLLLLA 600
  601 FFDNQDIWYE LTQNGLDYSN PPPWFKAAVS SKLVFRTKIK ALVEFSLVEI KQQEGSYTLH 660
  661 PVVQDWCYHI AASNDLTNQL QELAFISVGY TVPSRDTRDY ARLEQRLLPH ANNLIQRNIG 720
  721 YWLDIQPEDR INIFGAFHGL GNLYLHQGKL KEAEGMYQRA LAGKEKALGP DHTSALDTVN 780
  781 NLGLLYSDQG RLKEAEEMYQ RALAGYKKAL GPDHTSTLNT VNNLGNLYSD QGKLREAEEM 840
  841 YQQALAGYEK ALGPAHTSTL DTVNNLGNLY SDQGRLKEAE EMYQQALAGK EKALGLDHTS 900
  901 TLDTVGNLGL LYRDQGKLRE AEEMFQRALT GKEKALGPDH TSTLNTVNNL GNLYSDQGRL 960
  961 KEAEEMYQRA LAGKEKALGL DHTSTLNTVN NLGLLYRDQG KLKEAEEMFQ RALTGKEKAL1020
 1021 GPDHTSTLDT VGNLGLLYRD QGKLREAEEM FQRALAGYEK ALGPNHSKTR IVSNNLVSLA1080
 1081 SLHAGQDSPR HIHVAPNPFS GSTHTGAEHP WRPLKERPRK RDILYSILRK S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle