YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|59276024, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.64
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIEKHSVSE ENLQGSWVEL HFNNGGGSTS KAATDEQSAS TAPSGDLEKM LLDAQHESGR  60
   61 SSSRGSLPCD SPTRSQTPLH LRRGSEVHSS GEKNSSQSEE DYVERRKEVE ILMKKNADWI 120
  121 WDWSSRPENL PPKEFLLRHP KRSSTLSMRN TSVMKKGGIF SAEFLKVFLP SLVLSHILAV 180
  181 GLG

Type	Start	End	Confidence
Cytoplasmic	1	157	0.63
Transmembrane Helix	158	180	0.56
Non-Cytoplasmic	181	183	0.88