YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|190340044, gi...
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTTAAAQLN NNEEPGLNGS WVELEMNGNT QHQSPSLPSL LGNGNQGEPQ TSQALEAVQE  60
   61 EEEVLTGGLE HVPSSSSIHN GDMEKILLDA QHESSPSSSS CNSPPRPHSP DQDEGQIMFD 120
  121 VEMPSERDCQ SEDDSMEKDK EDDILMNKGE SWVADWSSRP ENVPPKEFHF RHPKRSGSVS 180
  181 LSMRKSGAMK KGGVFSAEFL KVFMPSLLLT HILALGIGVY IGKRLSTPPS STF

Type	Start	End	Confidence
Cytoplasmic	1	198	0.75
Transmembrane Helix	199	221	0.80
Non-Cytoplasmic	222	233	0.79