YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157799262, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKTKQEIYN KRPISPHLTI YKPQISSTLS ILHRITGVAL FFAVSILVWW LILSKYDNNY  60
   61 LQFAKCCIIK ICLVAVSYSW FYHLCNGIRH LFWDIGYGFS IKAVNITGWC VVVGSLLLTM 120
  121 LLWV

Type	Start	End	Confidence
Cytoplasmic	1	30	0.71
Transmembrane Helix	31	53	0.93
Non-Cytoplasmic	54	60	0.67
Transmembrane Helix	61	82	0.84
Cytoplasmic	83	100	0.55
Transmembrane Helix	101	123	0.88
Non-Cytoplasmic	124	124	0.64