YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52426017, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALFNQAPKS LCVLRLSAIG DVCHALAAVQ QIQKYWPETE ISWIVGKTEA QLLAGIPNAE  60
   61 LIVYDKKSGW KGVLALWRQL KHRRFDALLN MQTAFRASVL SFGIKARYKI GFGKQRAREG 120
  121 QWLFTNRKVR DPQNPHVLDG FMAFVEYLGV PVEAPHWQLA VSEQDKEAVK PYIDPARKNL 180
  181 IISPCSSKAE KDWLIERYAQ VANIAHQHNV NVILCGSSAK REVEILQKIT ALCDFQPVNL 240
  241 SGKTNLKQLV ALISMADLVI SPDSGPAHMA TTQGTPVIGL YAYHNPLRTG PYNNLANVVS 300
  301 VYEKNVRKEY GKPSDQLPWA TKLTGKNLMS QIQVEDVVEQ MKKLAVI

Type	Start	End	Confidence
Signal Peptide	1	27	0.91
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	347	0.99