YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|194507049, gi...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMNTSFGDD DDDGLMNEIN MTPLVDVMLV LLIIFLVTIP AMHHAVKIDL PRASSQPVEV  60
   61 KPKTIDVAIE SDGTVLWDDH PVSAADLQAR IAQAAQTNPQ PELHLRADRK VAYERVAEVM 120
  121 SAAQAGGLTK LGFVTEPKSN AK

Type	Start	End	Confidence
Non-Cytoplasmic	1	23	0.61
Transmembrane Helix	24	46	0.86
Cytoplasmic	47	142	0.64