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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|51595415, gi|...
Protein type: Transmembrane
Type Confidence: 0.68
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIPTLMATK RLLQNILMAL FLLALLVIGF RLWPHPPLSQ GLPLSTAYYD RHGTLLRLSL  60
   61 ANDDRYRLWT PLEEISPLVI QGIQLHEDRG FYYHPGVNPI SLLRGFWQSY VQGGRQQGGS 120
  121 TLTMQLARMH WHLNTRSPTG KLRQIARAIQ LELSYSKHDI LEAYLNYAPY GRNIESIAAA 180
  181 SLIYFDKKPQ QLTLPEALTL AVLPQSPSYR IDPTTGVLGS ALTQARNRLF VRWQQTYPTD 240
  241 SSQMALFQLP LSLRQPEKMP YIAPHFIEQI RRQNQQLANT QSQVDTTLDA NLQQLVEKQV 300
  301 EAFIRRNNSR GIHNAAVLLL DTRDMGVRAL VGSANYYDRE IQGQVNGTNA KRSPGSTLKP 360
  361 FIYALGLEQG ILHPMTILKD VPSSFGAYAP ENFDHRFLGP VTATDALNFS RNIPAVYVAS 420
  421 RLRQPTLYQF LRLSGVTNMA SENHYGLSLV LGGGEITLQE LARLYAMLAN RGTLHPIQMV 480
  481 QTDKTLPSIR LLSEAASFIT LDMLRQHRRP GDTLAQSPTS LPVYWKTGTS WGFRDAWSAG 540
  541 IFGPYVLIVW EGNFAGKGNS AFVGADAAAP LFFNIIDSIQ ANYPALREPK HPWPPQLKRV 600
  601 AICLASGNLP TPWCQQQGKT WFIPGKSPIK VDTVYRPVVI DINSGQAACL PYDRSQTRTE 660
  661 VFEFWPSDLA NVFAQAGLPK RQPPDRSHCK EGNTLASGNA PRITSPLRNT TYTLRQSQQG 720
  721 RDQIVFSATL DADSTTTYWF VDDIYLGSST SKKSIDWHPT RSGQYRIRAI DDHGRADSRL 780
  781 IRVEKVD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle