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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|51598212, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVSRRQFFK ICAGGMAGTT VAALGFAPSV ALAETRNYKL LRARETRNTC TYCSVGCGLL  60
   61 MYSLGDGAKN AKESIFHIEG DPDHPVNRGA LCPKGAGLVD FIHSESRLKY PEYRAPGSDK 120
  121 WQRITWDDAF TRIAKLMKED RDANFIQTND AGVTVNRWLS TGMLCASASS NETGYLTQKF 180
  181 SRALGMLAVD NQARVUHGPT VASLAPTFGR GAMTNHWVDI KNADLIIVMG GNAAEAHPVG 240
  241 FRWAMEAKIH NNAKLLVIDP RFTRTASVAD FYTPIRSGTD IAFLSGVLLY LISNNKINRE 300
  301 YVEAYTNASL LVREDYAFDD GLFSGYDAEN RQYDKTSWNY QLDEDGFAKR DVTLQHPRCV 360
  361 WNLLKEHVSR YTPEVVSNIC GTPKDDFLQV CEYLAETSVS NKTATFLYAL GWTQHSVGAQ 420
  421 NIRTMAMIQL LLGNMGMAGG GINALRGHSN IQGLTDLGLL SQSLPGYLNL PSEKQPDIDT 480
  481 YLKANTPKTL LPGQVNYWSN YPKFFVSLMK SFYGDNAQKE NGWGYDWLPK WDKGYDVLQY 540
  541 FEMMSQGKVN GYLCQGFNPI ASFPDKNKVT AALSKLKFLV TIDPLNTETA NFWQNHGEFN 600
  601 DVDPSKIQTE VFRLPSSCFA EENGSIVNSS RWLQWHWKGA DSPGEALNDG AILAGIFMRM 660
  661 REMYQREGGA VPEQVLNMTW DYLTPENPEP EEVAMESNGR ALADLTDADG KVLVKKGEQL 720
  721 STFAQLRDDG TTSSGCWIFA GSWTPAGNQM ARRDNADPSG LGNTLGWAWA WPLNRRILYN 780
  781 RASADPQGKP WDPKRQLLEW DGAKWAGIDV ADYSAAAPGS DVGPFIMQPE GMGRLFAIDK 840
  841 MAEGPFPEHY EPFETPLGTN PLHPNVISNP AARVFKDDLA AMGSHEQFPY VGTTYRLTEH 900
  901 FHYWTKHALL NAIAQPEQFV EIGEKLAAKK GIKQGDTVKV SSNRGFIKAK AVVTKRIRTL 960
  961 NVHGQEVDTI GIPIHWGYEG VAKKGFLANT LTPYVGDANT QTPEFKAFLV NVEKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle