YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52080277, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGTIVRISV FFFLLLMSYQ MMNRPYSQHY IDAMKKDAVT VAAQKDDLYQ ELLQKAPEYE  60
   61 VKAQNAKIDH IWKAMPGYNG LKVNIEKSYK KMKQAGEFDE KLLVYDQVKP DVHLESLKPE 120
  121 PIYRGHPDKP MVSFIINVAW GNEYLEEMLP VLQQHRIKAT FFLEGRWVKH HPELAKAIQN 180
  181 GGHEIGNHSY NHPDMSKLTR ERISEQLRMT NEQIQETLGV KPKWFAPPSG SFRKEVVDQA 240
  241 HKMGMGTIMW TVDTIDWQKP QPAVLQQRVL SKVHNGAMIL MHPTDPTAKS LAVLIQNLHE 300
  301 KGYQIGTVSQ LMNEKRLVEE

Type	Start	End	Confidence
Signal Peptide	1	20	0.73
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	320	0.98