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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|52002141, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKQLVLVG NGMAGVRAIE EILKISNEEF QITIFGSEPH PNYNRILLSK VLQGDTDVKD  60
   61 ITLNDWDWYE ENGIQLYTGE EVVKVDPESK TVITDTGRVQ PYDELILATG SLPFILPLPG 120
  121 ADKEGVTAFR DIKDTDIMLE ASKTYKKAAV IGGGLLGLEA ARGLLNLGMD VTVVHLAPYL 180
  181 MERQLDAAAG RLLQKELEKQ GMKFLLEKQT EEIYGETRVE GLKFKDGSTL EADLVVMAVG 240
  241 IKPNVQLGKD CGLPVNRGIV VNDYMETEVP NIYAVGECAE HRGIAYGLVA PLYEQAKVLA 300
  301 KKICGVETAP YEGSVLSTQL KVSGVEVFSA GDFNEDDGED KKALKVFDEQ DGIYKKIVLR 360
  361 GNQVIGAVLF GDSSEGNRLF SMIQKGADIS DTSKISILQP LNQEEGMSLT AAMSDDEIVC 420
  421 GCNGVSKGMI IQAIKEQGCT STDEIKACTG ASRSCGGCKP LVAEILQHTL GSEFDASAQK 480
  481 EAICGCTDLS RDELVAEIRE KGLTHTKEVM NVLGWKTAEG CSKCRPALNY YLGMINPKEY 540
  541 EDERESRFVN ERMHANIQKD GTYSVVPRMY GGVTNSNDLR RIADVVDKYE IPLVKMTGGQ 600
  601 RIDLIGVKKE DLPKVWADLD MPSGFAYGKT LRTVKTCVGE QFCRFGTQDS MALGIDLEKK 660
  661 FEGLYTPHKI KMAVSACPRN CAESGIKDIG VVGIDGGWEI YVGGNGGTHL RAGDLLMKVK 720
  721 TAEEVIEITG AYLQYYRETA NYLERTSAWI ERVGLSHVQS VLNDKEKRKE LNDRINQALS 780
  781 VHKDPWKDFL EDGKTTRQLF ENVVTS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle