YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52079994, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKTVGFIGL GVMGNSMASH ILAAGYPVSA YTRTKHKADS LVEKGAEWKS SVKALAQSSD  60
   61 VIITMVGYPK DVEEVYFGSE GIIENAKKGS YLIDMTTSKP SLAKQIETAA KEKGLYALDA 120
  121 PVSGGDVGAR NGTLAIMVGG ERKAYDECYP LFSIMGENIQ YQGPAGSGQH TKMCNQIAIA 180
  181 AGMIGVAEAM AYAEKSGLDP DNVLKSITTG AAGSWSLSNL APRMLKGDFE PGFYVKHFVK 240
  241 DMGIALEEAE LMGEKMPGLE LAKSLYDTLV EKGEENSGTQ SLYKLWTEYK

Type	Start	End	Confidence
Signal Peptide	1	18	0.95
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	290	0.98