YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52787833, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSALFKKLML SSLIGVSIGS ALFAPNAGAQ EPAVKPKKVD VIAHRGASGY APENTMAAFD  60
   61 KALQMKADYI ELDVQMSKDG ELVIIHDTTV NRTTDIDSVL PVAVKDLTLA ELRKLDAGSF 120
  121 FGPQFAGERI PTFEEVLDRY KGKVGMLIEL KEPARYPGIE GKVSAALKER RMDKPKNGKI 180
  181 IVQSFDFNSV YKIHQLLPSM PTGVLTSKAA DLTDAKLKEF SGYAKYVNAN LKNVAADPTL 240
  241 VPRIHALGMK ITPWTVRSRD EVPPLLKAGV DGIVTDFPDY VPKKVR

Type	Start	End	Confidence
Signal Peptide	1	29	0.98
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	286	0.99