YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52787931, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRLVRSIFL ITAAIAAFGF GFSGHAEAAS HSQPQLNPNK LLNVAHRGAS GHAPEHTLLA  60
   61 YKLGQKMKGD YIEIDLQMTK DGHLVAMHDE TLDRTTNGTG FVKDYTLKEI KELDAGSWFN 120
  121 EAYPERAKPE YAGLKVPTLE EIIQTFGRSA RYYIETKSPE DYDHMEEKLL DILKQYKLTG 180
  181 ADIHSSKVII QSFSPESLKI IHNANPNIPL VQLLWYDKPA AITDAELKQY QSYSVGLGMN 240
  241 FDRIGRAYVQ KIRRTGMLVH PYTVNKKEDM KRLLDWGATG MFTNFPDRLR DVLREKK

Type	Start	End	Confidence
Signal Peptide	1	28	0.97
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	297	0.99