YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46914732, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELFTYYPWL FPVFAAIFGL LIGSFLNVVI HRLPIMMERQ WKADCIECFP EFDKENKQEK  60
   61 DNNSVATTPV FNLSVPRSRC PHCQHAITMW ENIPVISWLV LKGKCSACGA KISARYPTIE 120
  121 LLTAVMTTII SLMLPSSLWA VAVIFFSFAL IALTFIDIDT MLLPDQITLP LMWAGIAAAL 180
  181 VGLSPVSLQD AIIGAMVGYL SLWSLFWSFK LITGKEGMGY GDFKLLAALG AWLGWQSLPF 240
  241 VVLLSSLVGA VCGIILLRVQ RSDSQTPFSF GPYLAMAGWI SILWGDQVIS WYLHSYIGM

Type	Start	End	Confidence
Non-Cytoplasmic	1	8	0.90
Transmembrane Helix	9	31	0.91
Cytoplasmic	32	131	0.93
Transmembrane Helix	132	156	0.81
Non-Cytoplasmic	157	166	0.65
Transmembrane Helix	167	186	0.87
Cytoplasmic	187	191	0.61
Transmembrane Helix	192	213	0.80
Non-Cytoplasmic	214	234	0.83
Transmembrane Helix	235	257	0.90
Cytoplasmic	258	267	0.78
Transmembrane Helix	268	289	0.85
Non-Cytoplasmic	290	299	0.80