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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54292937, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREEPNFKHY TRGGQISFHN LRMWDQITKT LVWVCLFLWV VLTGLITWLV ISPEKFHQAI  60
   61 AYYYASFLNL VGQKHTFTLP FHGKNYQQNV ETILHYPYYK ENADHMVDLL GKSSLAAFVF 120
  121 SFVLGLCFAF YFIHRGKAQR ANQFIRGSRI DTKENVIQQI LDKKENSDIT IDGFPLKANS 180
  181 EVQHLLVHGT VGTGKSQLIM KIMDALRKRG DRVIVYDKGC AFIPHYFDSN QDVILNPFDA 240
  241 RCPNWDMWLE APRDSDFENM AESLIPMHGD SEPFWVNAAR TVFSSVAAKM RKDKDRSVEK 300
  301 LLKLLLTGEF SHLEDYLKGT AAATLVSGKI EKTAISIRSV ITTYLKSLST LSGLDSEGAS 360
  361 PFSIRDYILN EQHSGWLFIS SNGEQHKSLK PLMSMWLAMA SLTLLSLTPN PDRRIWFICD 420
  421 ELPSLHKLPL LGETIAEVRK FGGCFLLGMQ SFSQLTKVYG QSGGAKELFD LLNTRFFFRS 480
  481 PSADMARLVA SELGEEEIEE SRENYSYGAN SIRDGISLGS QRVTRPIVSY PQILELEDLR 540
  541 CFVRLPGSYP ITQLTLELEN RPKYLKGFVE RQFIIDEMLQ KLVKETESTE DEAIAKRKCH 600
  601 NKKSVEIEFE V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle