YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|53753274, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEDALTVVA LRNKFYKDSQ RKVILALLIA IVVNVVLASL VVYMITHPPA PKYFATSING  60
   61 RITPLFPLDE PNQSDSAVLQ WANQAAIAAF TYNFVNYRDE LQASSGFFTA EGWDQFLGAL 120
  121 EQSNNLDAVK AKKLVVSAVA TRAPIILQKG VLNGRYSWRV QMPILVTYQS ASEFTQQNNV 180
  181 VTMLITRVST LNSPRGIGIS QFVVGPASGG VS

Type	Start	End	Confidence
Cytoplasmic	1	22	0.92
Transmembrane Helix	23	45	0.91
Non-Cytoplasmic	46	212	0.79